Transcript: lnc-SRD5A2-3:11

Basic information

LNCipedia transcript ID: lnc-SRD5A2-3:11 
LNCipedia gene ID: lnc-SRD5A2-3
Location (hg38): chr2:31524586-31580900
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2372 bp
Exons: 6
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000233139; ENST00000233139.1; SRD5A2-201
Alternative gene names: ENSG00000049319; SRD5A2; ENSG00000049319.2; OTTHUMG00000152057.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1641.3097 coding 
CPAT coding probability 97.86% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SRD5A2-3:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-XDH-1:2
3.1 lnc-XDH-1:2
4.0 lnc-XDH-1:2
4.1 lnc-DPY30-3:14
5.0 lnc-DPY30-3:14
5.1 lnc-RBKS-74:11
5.2 lnc-SRD5A2-3:11