Transcript: lnc-SRPK2-5:3

Basic information

LNCipedia transcript ID: lnc-SRPK2-5:3 
LNCipedia gene ID: lnc-SRPK2-5
Location (hg38): chr7:105117349-105203656
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 436 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT122611
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -37.2711 non-coding 
CPAT coding probability 0.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SRPK2-5:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SRPK2-5:3
4.0 lnc-SRPK2-5:3
4.1 lnc-SRPK2-5:3
5.0 lnc-SRPK2-5:3
5.1 lnc-POLR2J2-31:3
5.2 lnc-SRPK2-5:3