Transcript: lnc-SRRD-1:10

Basic information

LNCipedia transcript ID: lnc-SRRD-1:10 
LNCipedia gene ID: lnc-SRRD-1
Location (hg38): chr22:26512547-26521044
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 8121 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000261188.1|MICT00000231378.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 9.3721 non-coding 
CPAT coding probability 2.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SRRD-1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SRRD-1:10
5.0 lnc-SRRD-1:10
5.1 lnc-CABIN1-51:5
5.2 lnc-SRRD-1:10