Transcript: lnc-SRSF2-2:11

Basic information

LNCipedia transcript ID: lnc-SRSF2-2:11 
LNCipedia gene ID: lnc-SRSF2-2
RefSeq ID: NR_136416
Location (hg38): chr17:76962746-76969199
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 871 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_136416.1
Alternative gene names: LOC105371899


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -235.9057 non-coding 
CPAT coding probability 5.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SRSF2-2:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-ST6GALNAC2-17:7
5.1 lnc-ST6GALNAC2-17:7
5.2 lnc-SRSF2-2:11