Transcript: lnc-SRSF2-2:3

Basic information

LNCipedia transcript ID: lnc-SRSF2-2:3 
LNCipedia gene ID: lnc-SRSF2-2
Ensembl Gene ID: ENSG00000267568
Ensembl Transcript ID: ENST00000585902
Location (hg38): chr17:76950317-76953710
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 284 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT056097; ENST00000585902.2
Alternative gene names: ENSG00000267568.2; RP11-87G24.3; ENSG00000267568.6; AC016168.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -96.2856 non-coding 
CPAT coding probability 0.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SRSF2-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SRSF2-2:3
4.0 lnc-SRSF2-2:3
4.1 lnc-SRSF2-2:3
5.0 lnc-SRSF2-2:3
5.1 lnc-ST6GALNAC2-17:11
5.2 lnc-SRSF2-2:3