Transcript: lnc-SSR3-10:1

Basic information

LNCipedia transcript ID: lnc-SSR3-10:1 
LNCipedia gene ID: lnc-SSR3-10
Location (hg38): chr3:156815480-156816073
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 594 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT092868
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -134.4628 non-coding 
CPAT coding probability 0.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SSR3-10:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SSR3-10:1
4.0 lnc-SSR3-10:1
4.1 lnc-SSR3-10:1
5.0 lnc-SSR3-10:1
5.1 lnc-SHOX2-24:1
5.2 lnc-SSR3-10:1