Transcript: lnc-SSR3-11:1

Basic information

LNCipedia transcript ID: lnc-SSR3-11:1 
LNCipedia gene ID: lnc-SSR3-11
Location (hg38): chr3:156809592-156810705
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1114 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1021:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 85.2514 coding 
CPAT coding probability 99.05% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SSR3-11:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-SSR3-11:1
4.1 lnc-SSR3-11:1
5.0 lnc-SSR3-11:1
5.1 lnc-SHOX2-25:1
5.2 lnc-SSR3-11:1