Transcript: lnc-SSTR4-4:9

Basic information

LNCipedia transcript ID: lnc-SSTR4-4:9 
LNCipedia gene ID: lnc-SSTR4-4
Location (hg38): chr20:22728972-22746625
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 539 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT079010
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -23.172 non-coding 
CPAT coding probability 13.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SSTR4-4:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SSTR4-16:1
4.0 lnc-SSTR4-4:9
4.1 lnc-SSTR4-4:9
5.0 lnc-SSTR4-4:9
5.1 lnc-CST8-25:9
5.2 lnc-SSTR4-4:9