Transcript: lnc-SSU72P5-2:1

Basic information

LNCipedia transcript ID: lnc-SSU72P5-2:1 
LNCipedia gene ID: lnc-SSU72P5-2
Location (hg38): chr11:4179599-4202645
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 763 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT017640
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.5512 non-coding 
CPAT coding probability 1.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SSU72P5-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RRM1-2:2
4.0 lnc-RRM1-2:2
4.1 lnc-RRM1-2:2
5.0 lnc-RRM1-2:2
5.1 lnc-OR51M1-22:1
5.2 lnc-SSU72P5-2:1