Transcript: lnc-SSU72P5-2:5

Basic information

LNCipedia transcript ID: lnc-SSU72P5-2:5 
LNCipedia gene ID: lnc-SSU72P5-2
Location (hg38): chr11:4187142-4202655
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 460 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000254480.1|ENST00000525365.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -57.2718 non-coding 
CPAT coding probability 0.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SSU72P5-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RRM1-2:6
5.0 lnc-RRM1-2:6
5.1 lnc-OR51M1-22:5
5.2 lnc-SSU72P5-2:5