Transcript: lnc-ST3GAL1-8:5

Basic information

LNCipedia transcript ID: lnc-ST3GAL1-8:5 
LNCipedia gene ID: lnc-ST3GAL1-8
Location (hg38): chr8:133680431-133684111
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 435 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000104225.1|FTMT22900025351.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -49.6941 non-coding 
CPAT coding probability 1.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ST3GAL1-8:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ST3GAL1-8:5
5.0 lnc-ST3GAL1-8:5
5.1 lnc-FAM84B-76:5
5.2 lnc-ST3GAL1-8:5