Transcript: lnc-ST3GAL4-53:1

Basic information

LNCipedia transcript ID: lnc-ST3GAL4-53:1 
LNCipedia gene ID: lnc-ST3GAL4-53
Ensembl Gene ID: ENSG00000272642
Ensembl Transcript ID: ENST00000646216
Location (hg38): chr11:127188885-127200058
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1529 bp
Exons: 5
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000646216.1
Alternative gene names: ENSG00000272642.2; AP003121.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -83.5681 non-coding 
CPAT coding probability 0.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ST3GAL4-53:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-JAM3-53:1
5.1 lnc-JAM3-53:1
5.2 lnc-ST3GAL4-53:1