Transcript: lnc-ST3GAL4-55:5

Basic information

LNCipedia transcript ID: lnc-ST3GAL4-55:5 
LNCipedia gene ID: lnc-ST3GAL4-55
Ensembl Gene ID: ENSG00000255087
Ensembl Transcript ID: ENST00000647195
Location (hg38): chr11:127021765-127116181
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1994 bp
Exons: 10
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000647195.1
Alternative gene names: ENSG00000255087.3; AP001993.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -69.0173 non-coding 
CPAT coding probability 0.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ST3GAL4-55:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-JAM3-55:5
5.1 lnc-JAM3-55:5
5.2 lnc-ST3GAL4-55:5