Transcript: lnc-ST3GAL4-5:1

Basic information

LNCipedia transcript ID: lnc-ST3GAL4-5:1 
LNCipedia gene ID: lnc-ST3GAL4-5
Location (hg38): chr11:126702546-126709151
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3833 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000004262.1|MICT00000069984.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.3966 non-coding 
CPAT coding probability 6.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ST3GAL4-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-115C10.1.1-5:1
5.0 lnc-RP11-115C10.1.1-5:1
5.1 lnc-JAM3-59:1
5.2 lnc-ST3GAL4-5:1