Transcript: lnc-ST3GAL6-1:3

Basic information

LNCipedia transcript ID: lnc-ST3GAL6-1:3 
LNCipedia gene ID: lnc-ST3GAL6-1
Location (hg38): chr3:98902014-98912015
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4256 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000239462.1|MICT00000246688.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 34.2939 non-coding 
CPAT coding probability 1.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ST3GAL6-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ST3GAL6-1:3
5.0 lnc-ST3GAL6-1:3
5.1 lnc-OR5K4-14:1
5.2 lnc-ST3GAL6-1:3