Transcript: lnc-ST6GAL2-2:1

Basic information

LNCipedia transcript ID: lnc-ST6GAL2-2:1 
LNCipedia gene ID: lnc-ST6GAL2-2
Location (hg38): chr2:107382444-107385515
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1639 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004369; NONHSAT073062
Alternative gene names: XLOC_002251; linc-ST6GAL2-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -96.7039 non-coding 
CPAT coding probability 21.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ST6GAL2-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ST6GAL2-2:1
3.1 lnc-ST6GAL2-2:1
4.0 lnc-ST6GAL2-2:1
4.1 lnc-ST6GAL2-2:1
5.0 lnc-ST6GAL2-2:1
5.1 lnc-AFF3-99:1
5.2 lnc-ST6GAL2-2:1