Transcript: lnc-ST7L-3:10

Basic information

LNCipedia transcript ID: lnc-ST7L-3:10 
LNCipedia gene ID: lnc-ST7L-3
Location (hg38): chr1:112591482-112618941
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 572 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT005251
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 545.5363 coding 
CPAT coding probability 17.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ST7L-3:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RHOC-3:9
4.0 lnc-ST7L-3:10
4.1 lnc-ST7L-3:10
5.0 lnc-ST7L-3:10
5.1 lnc-PHTF1-13:9
5.2 lnc-ST7L-3:10