Transcript: lnc-ST8SIA4-3:8

Basic information

LNCipedia transcript ID: lnc-ST8SIA4-3:8 
LNCipedia gene ID: lnc-ST8SIA4-3
Location (hg38): chr5:100528200-100535243
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 6036 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000247877.2|ENCT00000360497.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.9174 non-coding 
CPAT coding probability 9.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ST8SIA4-3:8 no no no no

Available literature

  1. Yang (2015), Microarray profiling of long non-coding RNA (lncRNA) associated with hypertrophic cardiomyopathy., BMC Cardiovasc Disord


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ST8SIA4-3:8
5.0 lnc-ST8SIA4-3:8
5.1 lnc-ANKRD34B-239:7
5.2 lnc-ST8SIA4-3:8