Transcript: lnc-STAG1-5:1

Basic information

LNCipedia transcript ID: lnc-STAG1-5:1 
LNCipedia gene ID: lnc-STAG1-5
Location (hg38): chr3:136808551-136809623
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 709 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT092286
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 87.3833 coding 
CPAT coding probability 3.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-STAG1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-STAG1-5:1
4.0 lnc-STAG1-5:1
4.1 lnc-STAG1-5:1
5.0 lnc-STAG1-5:1
5.1 lnc-MSL2-9:1
5.2 lnc-STAG1-5:1