Transcript: lnc-STAG2-3:4

Basic information

LNCipedia transcript ID: lnc-STAG2-3:4 
LNCipedia gene ID: lnc-STAG2-3
Location (hg38): chrX:123912760-123913615
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 628 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT138442
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.5076 non-coding 
CPAT coding probability 1.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STAG2-3:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-STAG2-3:3
4.0 lnc-XIAP-3:4
4.1 lnc-XIAP-3:4
5.0 lnc-XIAP-3:4
5.1 lnc-TEX13C-12:3
5.2 lnc-STAG2-3:4