Transcript: lnc-STAR-1:2

Basic information

LNCipedia transcript ID: lnc-STAR-1:2 
LNCipedia gene ID: lnc-STAR-1
Location (hg38): chr8:38103833-38105777
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1945 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000102235.1|FTMT23000001841.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -107.1867 non-coding 
CPAT coding probability 2.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STAR-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-STAR-1:2
5.0 lnc-STAR-1:2
5.1 lnc-C8orf86-33:2
5.2 lnc-STAR-1:2