Transcript: lnc-STK10-1:1

Basic information

LNCipedia transcript ID: lnc-STK10-1:1 
LNCipedia gene ID: lnc-STK10-1
Location (hg38): chr5:172254418-172255439
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1022 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT105112
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 18.8229 non-coding 
CPAT coding probability 24.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STK10-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-STK10-1:1
4.0 lnc-STK10-1:1
4.1 lnc-STK10-1:1
5.0 lnc-STK10-1:1
5.1 lnc-PDLIM7-87:1
5.2 lnc-STK10-1:1