Transcript: lnc-STK17B-3:1

Basic information

LNCipedia transcript ID: lnc-STK17B-3:1 
LNCipedia gene ID: lnc-STK17B-3
Location (hg38): chr2:196408882-196421257
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 504 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: refGeneNc_736_NR_034036
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -111.214 non-coding 
CPAT coding probability 1.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STK17B-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-STK17B-3:1
4.0 lnc-STK17B-3:1
4.1 lnc-STK17B-3:1
5.0 lnc-STK17B-3:1
5.1 lnc-HSPD1-24:1
5.2 lnc-STK17B-3:1