Transcript: lnc-STK3-2:1

Basic information

LNCipedia transcript ID: lnc-STK3-2:1 
LNCipedia gene ID: lnc-STK3-2
Ensembl Gene ID: ENSG00000253948
Ensembl Transcript ID: ENST00000521696
Location (hg38): chr8:98996763-99013044
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 380 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000521696.1; RP11-410L14.2-001; OTTHUMT00000380654.1
Alternative gene names: ENSG00000253948.1; RP11-410L14.2; OTTHUMG00000164865.1; AC104986.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -238.7953 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STK3-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-STK3-2:1
4.0 lnc-STK3-2:1
4.1 lnc-STK3-2:1
5.0 lnc-STK3-2:1
5.1 lnc-ZNF706-75:3
5.2 lnc-STK3-2:1