Transcript: lnc-STK32C-2:1

Basic information

LNCipedia transcript ID: lnc-STK32C-2:1 
LNCipedia gene ID: lnc-STK32C-2
Ensembl Gene ID: ENSG00000234311
Ensembl Transcript ID: ENST00000450206
Location (hg38): chr10:132433733-132441484
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1013 bp
Exons: 2
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00018072; ENST00000450206.1; RP11-432J24.3-001; OTTHUMT00000051077.1; NONHSAT017074
Alternative gene names: XLOC_009003; linc-STK32C-2; ENSG00000234311.1; RP11-432J24.3; OTTHUMG00000019288.1; AL451069.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -13.7874 non-coding 
CPAT coding probability 14.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STK32C-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-STK32C-1:1
3.1 lnc-STK32C-2:1
4.0 lnc-STK32C-2:1
4.1 lnc-STK32C-2:1
5.0 lnc-STK32C-2:1
5.1 lnc-CALY-30:6
5.2 lnc-STK32C-2:1