Transcript: lnc-STMND1-4:1

Basic information

LNCipedia transcript ID: lnc-STMND1-4:1 
LNCipedia gene ID: lnc-STMND1-4
Location (hg38): chr6:16761080-16762652
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 549 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000229931.1|ENST00000423260.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -77.6064 non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STMND1-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP3-486B10.1.1-4:7
5.0 lnc-RP3-486B10.1.1-4:7
5.1 lnc-GMNN-62:1
5.2 lnc-STMND1-4:1