Transcript: lnc-STMND1-4:11

Basic information

LNCipedia transcript ID: lnc-STMND1-4:11 
LNCipedia gene ID: lnc-STMND1-4
Ensembl Gene ID: ENSG00000229931
Ensembl Transcript ID: ENST00000450930
Location (hg38): chr6:16761912-16762618
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 635 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000450930.1; RP1-151F17.1-002; OTTHUMT00000329724.1; NONHSAT107910
Alternative gene names: ENSG00000229931.1; RP1-151F17.1; OTTHUMG00000153136.1; AL137003.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -77.6064 non-coding 
CPAT coding probability 1.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STMND1-4:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP3-486B10.1.1-1:2
4.0 lnc-RP3-486B10.1.1-4:3
4.1 lnc-RP3-486B10.1.1-4:3
5.0 lnc-RP3-486B10.1.1-4:3
5.1 lnc-GMNN-62:11
5.2 lnc-STMND1-4:11