Transcript: lnc-STMP1-5:1

Basic information

LNCipedia transcript ID: lnc-STMP1-5:1 
LNCipedia gene ID: lnc-STMP1-5
Location (hg38): chr7:136025622-136030983
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 414 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT123536; FPKM1_group_30455_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -88.5965 non-coding 
CPAT coding probability 0.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STMP1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC015987.1-3:3
4.0 lnc-AC015987.1-3:3
4.1 lnc-AC015987.1-3:3
5.0 lnc-AC015987.1-3:3
5.1 lnc-TMEM140-15:1
5.2 lnc-STMP1-5:1