Transcript: lnc-STMP1-5:2

Basic information

LNCipedia transcript ID: lnc-STMP1-5:2 
LNCipedia gene ID: lnc-STMP1-5
Location (hg38): chr7:136025741-136030983
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 250 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00013606; NONHSAT123537
Alternative gene names: XLOC_006269; linc-CHRM2-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -88.5965 non-coding 
CPAT coding probability 0.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STMP1-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC015987.1-2:1
3.1 lnc-AC015987.1-3:1
4.0 lnc-AC015987.1-3:1
4.1 lnc-AC015987.1-3:1
5.0 lnc-AC015987.1-3:1
5.1 lnc-TMEM140-15:2
5.2 lnc-STMP1-5:2