Transcript: lnc-STMP1-8:7

Basic information

LNCipedia transcript ID: lnc-STMP1-8:7 
LNCipedia gene ID: lnc-STMP1-8
Location (hg38): chr7:136405262-136439945
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3079 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT123549; FPKM1_group_30481_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.0261 non-coding 
CPAT coding probability 0.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STMP1-8:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CHRM2-2:9
4.0 lnc-AC015987.1-8:7
4.1 lnc-AC015987.1-8:7
5.0 lnc-AC015987.1-8:7
5.1 lnc-TMEM140-18:7
5.2 lnc-STMP1-8:7