Transcript: lnc-STPG2-2:1

Basic information

LNCipedia transcript ID: lnc-STPG2-2:1 
LNCipedia gene ID: lnc-STPG2-2
Location (hg38): chr4:98251688-98262072
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 839 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000214559.3|ENST00000356499.2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -17.1927 non-coding 
CPAT coding probability 25.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STPG2-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C4orf37-2:2
5.0 lnc-C4orf37-2:2
5.1 lnc-ADH1B-30:1
5.2 lnc-STPG2-2:1