Transcript: lnc-STRA8-1:1

Basic information

LNCipedia transcript ID: lnc-STRA8-1:1 
LNCipedia gene ID: lnc-STRA8-1
Location (hg38): chr7:135198401-135200172
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1677 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000412549.1; AC009542.2-001; OTTHUMT00000340142.1
Alternative gene names: ENSG00000231794.1; AC009542.2; OTTHUMG00000155446.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -63.6966 non-coding 
CPAT coding probability 0.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STRA8-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-STRA8-1:1
4.0 lnc-STRA8-1:1
4.1 lnc-STRA8-1:1
5.0 lnc-STRA8-1:1
5.1 lnc-TMEM140-3:1
5.2 lnc-STRA8-1:1