Transcript: lnc-STRA8-1:3

Basic information

LNCipedia transcript ID: lnc-STRA8-1:3 
LNCipedia gene ID: lnc-STRA8-1
Ensembl Gene ID: ENSG00000231794
Ensembl Transcript ID: ENST00000595902
Location (hg38): chr7:135199559-135202356
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 646 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT123510; ENST00000595902.1; ENST00000595902.3
Alternative gene names: ENSG00000231794.3; AC009542.2; ENSG00000231794.5; AC009542.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -108.9232 non-coding 
CPAT coding probability 12.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STRA8-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-STRA8-1:3
4.0 lnc-STRA8-1:3
4.1 lnc-STRA8-1:3
5.0 lnc-STRA8-1:3
5.1 lnc-TMEM140-3:3
5.2 lnc-STRA8-1:3