Transcript: lnc-STS-171:1

Basic information

LNCipedia transcript ID: lnc-STS-171:1 
LNCipedia gene ID: lnc-STS-171
RefSeq ID: NR_136577
Location (hg38): chrX:6226358-6230291
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3934 bp
Exons: 1
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_136577.1
Alternative gene names: LOC105373156


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -21.5569 non-coding 
CPAT coding probability 13.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STS-171:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-GK-171:1
5.1 lnc-GK-171:1
5.2 lnc-STS-171:1