Transcript: lnc-STX18-1:9

Basic information

LNCipedia transcript ID: lnc-STX18-1:9 
LNCipedia gene ID: lnc-STX18-1
Location (hg38): chr4:4544738-4569544
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 776 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT094938
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -30.2293 non-coding 
CPAT coding probability 0.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STX18-1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-STX18-1:9
4.0 lnc-STX18-1:9
4.1 lnc-STX18-1:9
5.0 lnc-STX18-1:9
5.1 lnc-PSAPL1-29:9
5.2 lnc-STX18-1:9