Transcript: lnc-STX1B-1:1

Basic information

LNCipedia transcript ID: lnc-STX1B-1:1 
LNCipedia gene ID: lnc-STX1B-1
Ensembl Gene ID: ENSG00000275263
Ensembl Transcript ID: ENST00000614997
Location (hg38): chr16:30956872-30957199
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 328 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000614997.1
Alternative gene names: ENSG00000275263.1; RP11-1072A3.4; AC135048.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -286.2974 non-coding 
CPAT coding probability 0.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STX1B-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-STX1B-1:1
4.1 lnc-STX1B-1:1
5.0 lnc-STX1B-1:1
5.1 lnc-SULT1A2-99:1
5.2 lnc-STX1B-1:1