Transcript: lnc-STX8-1:11

Basic information

LNCipedia transcript ID: lnc-STX8-1:11 
LNCipedia gene ID: lnc-STX8-1
Location (hg38): chr17:9644685-9645354
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 670 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000265349.1|FTMT26600000572.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -118.1569 non-coding 
CPAT coding probability 1.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STX8-1:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-STX8-1:11
5.0 lnc-STX8-1:11
5.1 lnc-STX8-1:11
5.2 lnc-STX8-1:11