Transcript: lnc-STYK1-2:2

Basic information

LNCipedia transcript ID: lnc-STYK1-2:2 
LNCipedia gene ID: lnc-STYK1-2
Location (hg38): chr12:10718117-10722396
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 548 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT026897
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
NGYGFINR 95.2380952380952% sense-2
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.0088 non-coding 
CPAT coding probability 10.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-STYK1-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-STYK1-2:2
4.0 lnc-STYK1-2:2
4.1 lnc-STYK1-2:2
5.0 lnc-STYK1-2:2
5.1 lnc-M6PR-42:2
5.2 lnc-STYK1-2:2