Transcript: lnc-SUCLG1-3:2

Basic information

LNCipedia transcript ID: lnc-SUCLG1-3:2 
LNCipedia gene ID: lnc-SUCLG1-3
Location (hg38): chr2:82477135-82538711
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 687 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00003330; NONHSAT071921
Alternative gene names: XLOC_002184; linc-LRRTM1-7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.7773 non-coding 
CPAT coding probability 0.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SUCLG1-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SUCLG1-3:1
3.1 lnc-SUCLG1-3:2
4.0 lnc-SUCLG1-3:2
4.1 lnc-SUCLG1-3:2
5.0 lnc-SUCLG1-3:2
5.1 lnc-ZNF514-184:1
5.2 lnc-SUCLG1-3:2