Transcript: lnc-SUMF2-18:2

Basic information

LNCipedia transcript ID: lnc-SUMF2-18:2 
LNCipedia gene ID: lnc-SUMF2-18
RefSeq ID: NR_026929
Location (hg38): chr7:56496223-56497284
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1062 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT120761; NR_026929; NR_026929.1
Alternative gene names: DKFZp434L192


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.3693 non-coding 
CPAT coding probability 14.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SUMF2-18:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SUMF2-2:4
4.0 lnc-SUMF2-2:4
4.1 lnc-SUMF2-2:4
5.0 lnc-SUMF2-2:4
5.1 lnc-CCT6A-21:2
5.2 lnc-SUMF2-18:2