Transcript: lnc-SUMO1-1:2

Basic information

LNCipedia transcript ID: lnc-SUMO1-1:2 
LNCipedia gene ID: lnc-SUMO1-1
Location (hg38): chr2:202178667-202201921
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 353 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT076436
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -248.9141 non-coding 
CPAT coding probability 3.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SUMO1-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SUMO1-1:2
4.0 lnc-SUMO1-1:2
4.1 lnc-SUMO1-1:2
5.0 lnc-SUMO1-1:2
5.1 lnc-HSPD1-71:1
5.2 lnc-SUMO1-1:2