Transcript: lnc-SUMO1-2:4

Basic information

LNCipedia transcript ID: lnc-SUMO1-2:4 
LNCipedia gene ID: lnc-SUMO1-2
RefSeq ID: NR_135243
Location (hg38): chr2:202112243-202117058
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1547 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135243.1
Alternative gene names: LOC729224


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -89.2195 non-coding 
CPAT coding probability 2.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SUMO1-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-HSPD1-69:3
5.1 lnc-HSPD1-69:3
5.2 lnc-SUMO1-2:4