Transcript: lnc-SUMO1-8:1

Basic information

LNCipedia transcript ID: lnc-SUMO1-8:1 
LNCipedia gene ID: lnc-SUMO1-8
Ensembl Gene ID: ENSG00000273209
Ensembl Transcript ID: ENST00000608741
Location (hg38): chr2:202032770-202033537
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 768 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000608741.1
Alternative gene names: ENSG00000273209.1; RP11-107N15.1; AC069148.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -301.8948 non-coding 
CPAT coding probability 3.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SUMO1-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SUMO1-8:1
4.0 lnc-SUMO1-8:1
4.1 lnc-SUMO1-8:1
5.0 lnc-SUMO1-8:1
5.1 lnc-HSPD1-67:4
5.2 lnc-SUMO1-8:1