Transcript: lnc-SUN3-1:1

Basic information

LNCipedia transcript ID: lnc-SUN3-1:1 
LNCipedia gene ID: lnc-SUN3-1
Location (hg38): chr7:48080815-48082957
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 258 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00013798; NONHSAT120527
Alternative gene names: XLOC_006436; linc-SUN3-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.573 non-coding 
CPAT coding probability 0.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SUN3-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SUN3-1:1
3.1 lnc-SUN3-1:1
4.0 lnc-SUN3-1:1
4.1 lnc-SUN3-1:1
5.0 lnc-SUN3-1:1
5.1 lnc-TNS3-7:5
5.2 lnc-SUN3-1:1