Transcript: lnc-SUSD1-1:2

Basic information

LNCipedia transcript ID: lnc-SUSD1-1:2 
LNCipedia gene ID: lnc-SUSD1-1
Location (hg38): chr9:112033925-112037642
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3030 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000504635
Alternative gene names: ENSG00000249455


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -46.8008 non-coding 
CPAT coding probability 1.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SUSD1-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SUSD1-1:1
3.1 lnc-SUSD1-1:2
4.0 lnc-SUSD1-1:2
4.1 lnc-SUSD1-1:2
5.0 lnc-SUSD1-1:2
5.1 lnc-SLC46A2-34:4
5.2 lnc-SUSD1-1:2