Transcript: lnc-SV2B-1:9

Basic information

LNCipedia transcript ID: lnc-SV2B-1:9 
LNCipedia gene ID: lnc-SV2B-1
Location (hg38): chr15:91635664-91637078
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 601 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024008; NONHSAT048504
Alternative gene names: XLOC_011354; linc-SLCO3A1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -264.5174 non-coding 
CPAT coding probability 4.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SV2B-1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SLCO3A1-1:2
3.1 lnc-SLCO3A1-1:2
4.0 lnc-SLCO3A1-1:2
4.1 lnc-SV2B-1:9
5.0 lnc-SV2B-1:9
5.1 lnc-TTLL13P-47:9
5.2 lnc-SV2B-1:9