Transcript: lnc-SWT1-1:15

Basic information

LNCipedia transcript ID: lnc-SWT1-1:15 
LNCipedia gene ID: lnc-SWT1-1
Location (hg38): chr1:185318136-185373838
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 363 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000273004.1|FTMT20300021371.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 6.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SWT1-1:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SWT1-1:15
5.0 lnc-SWT1-1:15
5.1 lnc-C1orf21-16:14
5.2 lnc-SWT1-1:15