Transcript: lnc-SYNC-1:2

Basic information

LNCipedia transcript ID: lnc-SYNC-1:2 
LNCipedia gene ID: lnc-SYNC-1
Location (hg38): chr1:32705602-32725257
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 444 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224409.1|ENCT00000023934.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.4203 non-coding 
CPAT coding probability 5.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SYNC-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SYNC-1:2
5.0 lnc-SYNC-1:2
5.1 lnc-RNF19B-8:1
5.2 lnc-SYNC-1:2