Transcript: lnc-SYNE3-1:9

Basic information

LNCipedia transcript ID: lnc-SYNE3-1:9 
LNCipedia gene ID: lnc-SYNE3-1
Location (hg38): chr14:95407265-95408638
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1374 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1586:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -25.9217 non-coding 
CPAT coding probability 1.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SYNE3-1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LINC00341:4
4.1 LINC00341:4
5.0 LINC00341:4
5.1 lnc-SYNE3-1:5
5.2 lnc-SYNE3-1:9