Transcript: lnc-SYNE3-3:4

Basic information

LNCipedia transcript ID: lnc-SYNE3-3:4 
LNCipedia gene ID: lnc-SYNE3-3
Location (hg38): chr14:95522012-95526040
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 665 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022845; NONHSAT039449
Alternative gene names: XLOC_011112; linc-C14orf49


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -255.5321 non-coding 
CPAT coding probability 0.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SYNE3-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C14orf49-3:1
3.1 lnc-C14orf49-3:1
4.0 lnc-C14orf49-3:1
4.1 lnc-C14orf49-3:1
5.0 lnc-C14orf49-3:1
5.1 lnc-SYNE3-3:1
5.2 lnc-SYNE3-3:4